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Supreme Court Settles Rule 96(10) Dispute: What Its Omission Means for Pending GST Proceedings

The Supreme Court says Rule 96(10)’s omission applies to proceedings pending on 8 October 2024 that were based on the restriction. Final cases and other GST disputes are not automatically reopened or extinguished.
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The Supreme Court of India has held that omitting Rule 96(10) of the Central Goods and Services Tax Rules, 2017 ended proceedings still pending on 8 October 2024 when they were based on that rule. The ruling concerns disputes over IGST refunds on exports; it does not extinguish unrelated GST cases, automatically reopen matters that had become final, or guarantee that every exporter will receive a refund.

What the Supreme Court decided

In M/s Goodluck India Limited & Anr. v. Union of India & Ors., 2026 INSC 821, decided on 6 August 2026, the Court considered whether omission of Rule 96(10) benefited exporters with refund proceedings still pending. It held that the omission applied to those pending proceedings. Since the rule was removed without a saving clause or another legal device to continue proceedings under it, the former restriction could not remain their basis. Read the Supreme Court order.

The result is narrower than saying that the omission extinguishes “all pending GST proceedings.” It addresses pending matters founded on Rule 96(10), in disputes involving the IGST refund route for exports. A proceeding based on another rule or ground is not resolved by this holding.

Why Rule 96(10) mattered to exporters

Rule 96(10) restricted the IGST refund route for exporters who had received supplies after availing benefits under specified notifications. Its omission, effective 8 October 2024 through Notification No. 20/2024, raised a procedural question: could the department continue to pursue a case under the removed restriction if the proceeding was not yet final?

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The Union argued that the omission was prospective and that earlier-period proceedings survived. Exporters argued that, without a provision saving pending cases, proceedings under the omitted rule could not continue. The Supreme Court accepted the exporters’ position for the pending matters before it.

How the Court reached its conclusion

An omitted rule needs a basis for continuing pending proceedings

The Court applied the Constitution Bench decision in Kolhapur Canesugar Works Ltd. v. Union of India. As the Supreme Court explained that principle, omitting a rule removes it from the rule book. Proceedings under it can continue only if an express continuation provision or a legal fiction preserves them. The Court noted that Section 6 of the General Clauses Act did not apply to omission of a rule in the precedent because the rule was neither a Central Act nor a regulation. The Goodluck India order discusses the precedent.

The Council recommendation did not preserve the rule for pending cases

The 54th GST Council meeting took place on 9 September 2024. Its Law Committee recommended prospective omission, but the judgment records the Union’s concession that the recommendation was advisory, not mandatory. The Court also found no saving or sunset clause in the omission itself.

The order quoted the Law Committee’s stated reason: “The Law Committee observed that operation of rule 96(10) is leading to unnecessary complications without any intended benefit being served and therefore recommended that rule 96(10), rule 89(4A) & rule 89(4B) of the CGST Rules, 2017 may be omitted with prospective effect and that consequential amendments in clause (b) of sub-rule (4B) of rule 86, clause B, clause C and clause E of sub-rule (4) of rule 89 and Explanation (a) to sub-rule (5) of rule 89 of CGST Rules may be made.” The Court reasoned that a recommendation to remove unnecessary complications could not mean those same complications should remain alive in pending proceedings. The quoted recommendation appears in the Supreme Court order.

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Does the ruling apply to your refund dispute?

Use the case’s procedural boundary rather than treating it as a blanket cancellation of GST disputes. The relevant questions are:

  • Was the matter pending on 8 October 2024? The holding addresses proceedings pending on the effective date of omission.
  • Does the disputed action rely on Rule 96(10)? The ruling concerns proceedings founded on that omitted restriction, not every refund denial or GST demand.
  • Had the matter already become final? The order does not establish a general mechanism for reopening final cases. It should not be read as automatically reviving them.

If these facts appear to match your case, the judgment may resolve the Rule 96(10) basis of the pending proceeding. It does not decide every other ground that may affect the individual claim or establish that payment is immediately due. The procedural status and remaining merits must be assessed in the relevant proceeding.

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What the Court did—and did not—decide

The Supreme Court dismissed the Union’s appeals and directed that its order be sent to all High Courts, with relevant matters placed expeditiously before the appropriate roster courts. It dismissed two assessee petitions challenging Rule 96(10)’s validity as infructuous. The Court therefore did not rule that the rule was unconstitutional. See the order’s disposition.

Before the Supreme Court ruling, High Courts had considered the consequences of the omission, including whether it applied to cases pending on 8 October 2024 where final adjudication had not occurred. That earlier context is secondary to the Supreme Court’s controlling decision on the pending-proceedings issue.

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